ReddRadar
Topic: agent-orchestration
2,114 skills in this topic.
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kraken2-taxonomic-classifier
Kraken2 taxonomic classification skill for rapid metagenomic read assignment
a5c-ai/babysitter 514
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mageck-crispr-analyzer
MAGeCK CRISPR screen analysis skill for gene essentiality scoring
a5c-ai/babysitter 514
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maxquant-processor
MaxQuant mass spectrometry skill for protein identification and quantification
a5c-ai/babysitter 514
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megahit-assembler
MEGAHIT metagenomic assembly skill for reconstructing genomes from short reads
a5c-ai/babysitter 514
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metaphlan-profiler
MetaPhlAn metagenomic profiling skill for species-level community composition
a5c-ai/babysitter 514
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nextflow-pipeline-executor
Nextflow workflow management skill for reproducible bioinformatics pipelines
a5c-ai/babysitter 514
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perseus-statistical-analyzer
Perseus statistical analysis skill for proteomics data analysis and visualization
a5c-ai/babysitter 514
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pharmgkb-annotator
PharmGKB pharmacogenomics annotation skill for drug-gene interaction assessment
a5c-ai/babysitter 514
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phylogenetics-tree-builder
Phylogenetic analysis skill for constructing evolutionary trees and assessing relationships
a5c-ai/babysitter 514
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pymol-visualizer
PyMOL molecular visualization skill for structure rendering and analysis
a5c-ai/babysitter 514
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qiime2-microbiome-analyzer
QIIME2 microbiome analysis skill for 16S rRNA profiling and diversity analysis
a5c-ai/babysitter 514
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rdkit-chemoinformatics
RDKit chemoinformatics skill for molecular property calculation and compound library management
a5c-ai/babysitter 514
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salmon-quantifier
Salmon pseudo-alignment skill for fast and accurate transcript quantification
a5c-ai/babysitter 514
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samtools-bam-processor
BAM/SAM file manipulation skill for sorting, indexing, filtering, and extracting alignment data
a5c-ai/babysitter 514
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seurat-single-cell-analyzer
Seurat single-cell analysis skill for clustering, annotation, and trajectory analysis
a5c-ai/babysitter 514
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singularity-container-manager
Singularity container management skill for HPC-compatible containerized execution
a5c-ai/babysitter 514
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snakemake-workflow-manager
Snakemake workflow management skill for rule-based pipeline execution
a5c-ai/babysitter 514
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star-rnaseq-aligner
STAR alignment skill for splice-aware RNA-seq read mapping with comprehensive QC metrics
a5c-ai/babysitter 514
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string-network-analyzer
STRING protein interaction network skill for functional enrichment and network visualization
a5c-ai/babysitter 514
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structural-variant-detector
Structural variant detection skill for identifying CNVs, inversions, translocations, and complex rearrangements
a5c-ai/babysitter 514
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tmb-msi-calculator
Tumor mutation burden and microsatellite instability calculation skill for immunotherapy biomarkers
a5c-ai/babysitter 514
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ucsc-genome-browser-querier
UCSC Genome Browser query skill for genome annotation retrieval and track data access
a5c-ai/babysitter 514
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vep-variant-annotator
Variant Effect Predictor skill for comprehensive variant annotation with clinical database integration
a5c-ai/babysitter 514
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adverse-event-reporter
Adverse event monitoring and reporting skill for MDR/MEDWATCH compliance
a5c-ai/babysitter 514