Agent skills
Skills you can use with AI coding agents, indexed from public GitHub repositories.
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data-viz-plots
Create publication-quality plots and visualizations using matplotlib and seaborn. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-atac-seq-nucleosome-positioning
Extract nucleosome positions from ATAC-seq data using NucleoATAC, ATACseqQC, and fragment analysis. Use when analyzing chromatin organization, identifying nucleosome-free regions at promoters, or characterizing nucleosome occupancy patterns from ATAC-seq fragment size distributions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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ontology-validator
Validate material sample annotations and data structures against ontology constraints. Use when checking if CMSO annotations are correct, verifying that required properties are present, or validating that object property relationships have consistent domain and range. Catches unknown classes, unknown properties, domain mismatches, and missing required fields.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-alignment-indexing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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clinpgx-database
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-rnaseq-to-de
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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cancer-metabolism-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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fitness-analyzer
分析运动数据、识别运动模式、评估健身进展，并提供个性化训练建议。支持与慢性病数据的关联分析。
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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long-read-sequencing-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-population-genetics-population-structure
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tcr-pmhc-prediction-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-hi-c-analysis-contact-pairs
Process Hi-C read pairs using pairtools. Parse alignments, filter duplicates, classify pairs, and generate contact statistics from Hi-C sequencing data. Use when processing raw Hi-C read pairs.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tooluniverse-disease-research
Generate comprehensive disease research reports using 100+ ToolUniverse tools. Creates a detailed markdown report file and progressively updates it with findings from 10 research dimensions. All information includes source references. Use when users ask about diseases, syndromes, or need systematic disease analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-hi-c-analysis-hic-differential
Compare Hi-C contact matrices between conditions to identify differential chromatin interactions. Compute log2 fold changes, statistical significance, and visualize differential contact maps. Use when comparing Hi-C contacts between conditions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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phylogenetics
Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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xlsx
Comprehensive spreadsheet creation, editing, and analysis with support for formulas, formatting, data analysis, and visualization. When Claude needs to work with spreadsheets (.xlsx, .xlsm, .csv, .tsv, etc) for: (1) Creating new spreadsheets with formulas and formatting, (2) Reading or analyzing data, (3) Modify existing spreadsheets while preserving formulas, (4) Data analysis and visualization in spreadsheets, or (5) Recalculating formulas
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-machine-learning-model-validation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-methylation-bismark-alignment
Bisulfite sequencing read alignment using Bismark with bowtie2/hisat2. Handles genome preparation and produces BAM files with methylation information. Use when aligning WGBS, RRBS, or other bisulfite-converted sequencing reads to a reference genome.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-longread-structural-variants
Detect structural variants from long-read alignments using Sniffles, cuteSV, and SVIM. Use when detecting deletions, insertions, inversions, translocations, or complex rearrangements from ONT or PacBio data, especially those missed by short-read methods.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-multi-omics-data-harmonization
Preprocessing and harmonization of multi-omics data before integration. Covers normalization, batch correction, feature alignment, and missing value handling across data types. Use when preparing multi-omics datasets for integration analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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exosome-ev-analysis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tooluniverse-cancer-variant-interpretation
Provide comprehensive clinical interpretation of somatic mutations in cancer. Given a gene symbol + variant (e.g., EGFR L858R, BRAF V600E) and optional cancer type, performs multi-database analysis covering clinical evidence (CIViC), mutation prevalence (cBioPortal), therapeutic associations (OpenTargets, ChEMBL, FDA), resistance mechanisms, clinical trials, prognostic impact, and pathway context. Generates an evidence-graded markdown report with actionable recommendations for precision oncology. Use when oncologists, molecular tumor boards, or researchers ask about treatment options for specific cancer mutations, resistance mechanisms, or clinical trial matching.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-crispr-editing-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-population-genetics-plink-basics
FreedomIntelligence/OpenClaw-Medical-Skills 2,009