Topic: skills
17,247 skills in this topic.
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bio-microbiome-functional-prediction
Predict metagenome functional content from 16S rRNA marker gene data using PICRUSt2. Infer KEGG, MetaCyc, and EC abundances from ASV tables. Use when functional profiling is needed from 16S data without shotgun metagenomics sequencing.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-tcr-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-genome-engineering-hdr-template-design
Design homology-directed repair donor templates for CRISPR knock-ins using primer3-py. Create ssODN, dsDNA, or plasmid templates with optimized homology arms. Use when designing donor templates for precise insertions, tagging, or allele replacement.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tme-immune-profiling-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-longread-structural-variants
Detect structural variants from long-read alignments using Sniffles, cuteSV, and SVIM. Use when detecting deletions, insertions, inversions, translocations, or complex rearrangements from ONT or PacBio data, especially those missed by short-read methods.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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long-read-sequencing-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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protein-design-workflow
End-to-end guidance for protein design pipelines. Use this skill when: (1) Starting a new protein design project, (2) Need step-by-step workflow guidance, (3) Understanding the full design pipeline, (4) Planning compute resources and timelines, (5) Integrating multiple design tools.
For tool selection, use binder-design. For QC thresholds, use protein-qc.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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chemistry-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-clip-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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adhd-daily-planner
Time-blind friendly planning, executive function support, and daily structure for ADHD brains. Specializes in realistic time estimation, dopamine-aware task design, and building systems that actually work for neurodivergent minds.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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kragen-knowledge-graph
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-data-visualization-upset-plots
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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latchbio-integration
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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deep-research-swarm
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-multi-omics-data-harmonization
Preprocessing and harmonization of multi-omics data before integration. Covers normalization, batch correction, feature alignment, and missing value handling across data types. Use when preparing multi-omics datasets for integration analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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autonomous-oncology-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tooluniverse-gene-enrichment
Perform comprehensive gene enrichment and pathway analysis using gseapy (ORA and GSEA), PANTHER, STRING, Reactome, and 40+ ToolUniverse tools. Supports GO enrichment (BP, MF, CC), KEGG, Reactome, WikiPathways, MSigDB Hallmark, and 220+ Enrichr libraries. Handles multiple ID types (gene symbols, Ensembl, Entrez, UniProt), multiple organisms (human, mouse, rat, fly, worm, yeast), customizable backgrounds, and multiple testing correction (BH, Bonferroni). Use when users ask about gene enrichment, pathway analysis, GO term enrichment, KEGG pathway analysis, GSEA, over-representation analysis, functional annotation, or gene set analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-primer-design-primer-validation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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flowio
Parse FCS (Flow Cytometry Standard) files v2.0-3.1. Extract events as NumPy arrays, read metadata/channels, convert to CSV/DataFrame, for flow cytometry data preprocessing.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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single-cell-clustering-and-batch-correction-with-omicverse
Guide Claude through omicverse's single-cell clustering workflow, covering preprocessing, QC, multimethod clustering, topic modeling, cNMF, and cross-batch integration as demonstrated in t_cluster.ipynb and t_single_batch.ipynb.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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latex-posters
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, figure integration, and poster-specific best practices for visual communication.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-small-rna-seq-differential-mirna
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-sequence-similarity
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-reporting-figure-export
FreedomIntelligence/OpenClaw-Medical-Skills 2,009