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Topic: skills

17,247 skills in this topic.

bio-genome-assembly-contamination-detection
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-reporting-jupyter-reports
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
shap Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force, heatmap), debugging models, analyzing model bias or fairness, comparing models, or implementing explainable AI. Works with tree-based models (XGBoost, LightGBM, Random Forest), deep learning (TensorFlow, PyTorch), linear models, and any black-box model.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-expression-matrix-metadata-joins
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clip-seq-binding-site-annotation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
fastq-analysis-pipeline Guide through omicverse's alignment module for SRA downloading, FASTQ quality control, STAR alignment, gene quantification, and single-cell kallisto/bustools pipelines covering both bulk and single-cell RNA-seq workflows.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-proteomics-spectral-libraries Build, manage, and search spectral libraries for proteomics. Use when creating or working with spectral libraries for DIA analysis. Covers DDA-based library generation, predicted libraries (Prosit, DeepLC), and library formats.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-immunoinformatics-epitope-prediction Predict B-cell and T-cell epitopes using BepiPred, IEDB tools, and structure-based methods for vaccine and antibody design. Identify immunogenic regions in antigens. Use when designing vaccines, mapping antibody binding sites, or predicting immunogenic peptides.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-primer-design-primer-basics
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-epidemiological-genomics-pathogen-typing Perform multi-locus sequence typing (MLST), core genome MLST, and SNP-based strain typing for bacterial isolate characterization using mlst and chewBBACA. Use when identifying strain types, tracking outbreak clones, or characterizing bacterial isolates.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
receiving-code-review Use when receiving code review feedback, before implementing suggestions, especially if feedback seems unclear or technically questionable - requires technical rigor and verification, not performative agreement or blind implementation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
protocolsio-integration Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-differential-expression-batch-correction Remove batch effects from RNA-seq data using ComBat, ComBat-Seq, limma removeBatchEffect, and SVA for unknown batch variables. Use when correcting batch effects in expression data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
data-transform Transform, clean, reshape, and preprocess data using pandas and numpy. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clinical-databases-myvariant-queries Query myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request. Use when annotating variants with clinical and population data from multiple sources simultaneously.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
biomaster-workflows
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tpd-ternary-complex-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
agent-browser Browse the web for any task — research topics, read articles, interact with web apps, fill forms, take screenshots, extract data, and test web pages. Use whenever a browser would be useful, not just when the user explicitly asks.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-validation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
autonomous-oncology-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-pairwise Perform pairwise sequence alignment using Biopython Bio.Align.PairwiseAligner. Use when comparing two sequences, finding optimal alignments, scoring similarity, and identifying local or global matches between DNA, RNA, or protein sequences.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-indexing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-atac-seq-motif-deviation Analyze transcription factor motif accessibility variability using chromVAR. Use when identifying which TF motifs show variable accessibility across samples or conditions in ATAC-seq data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
adhd-daily-planner Time-blind friendly planning, executive function support, and daily structure for ADHD brains. Specializes in realistic time estimation, dopamine-aware task design, and building systems that actually work for neurodivergent minds.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009