Topic: openclaw-skills
1,539 skills in this topic.
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bio-causal-genomics-mendelian-randomization
Estimate causal effects between exposures and outcomes using genetic variants as instrumental variables with TwoSampleMR. Implements IVW, MR-Egger, weighted median, and MR-PRESSO methods for robust causal inference from GWAS summary statistics. Use when testing whether an exposure causally affects an outcome using genetic instruments.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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epidemiologist-analyst
Analyzes disease patterns and health events through epidemiological lens using surveillance systems,
outbreak investigation methods, and disease modeling frameworks.
Provides insights on disease spread, risk factors, prevention strategies, and public health interventions.
Use when: Disease outbreaks, health policy evaluation, risk assessment, intervention planning.
Evaluates: Transmission dynamics, risk factors, causality, population health impact, intervention effectiveness.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-causal-genomics-fine-mapping
Identify likely causal variants within GWAS loci using SuSiE for sum of single effects regression and FINEMAP for shotgun stochastic search. Computes posterior inclusion probabilities and credible sets to prioritize variants for functional follow-up. Use when narrowing GWAS association signals to candidate causal variants or building credible sets for functional validation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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pdb-database
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-bedgraph-handling
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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ehr-fhir-integration
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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drugbank-search
Search DrugBank comprehensive drug database with natural language queries. Drug mechanisms, interactions, and safety data powered by Valyu.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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timesfm-forecasting
Zero-shot time series forecasting with Google's TimesFM foundation model. Use for any univariate time series (sales, sensors, energy, vitals, weather) without training a custom model. Supports CSV/DataFrame/array inputs with point forecasts and prediction intervals. Includes a preflight system checker script to verify RAM/GPU before first use.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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time-stepping
Plan and control time-step policies for simulations. Use when coupling CFL/physics limits with adaptive stepping, ramping initial transients, scheduling outputs/checkpoints, or planning restart strategies for long runs.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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requesting-code-review
Use when completing tasks, implementing major features, or before merging to verify work meets requirements
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-similarity-searching
Performs molecular similarity searches using Tanimoto coefficient on fingerprints via RDKit. Finds structurally similar compounds using ECFP or MACCS keys and clusters molecules by structural similarity using Butina clustering. Use when finding analogs of a query compound or clustering chemical libraries.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-vcf-manipulation
Merge, concatenate, sort, intersect, and subset VCF files using bcftools. Use when combining variant files, comparing call sets, or restructuring VCF data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-sequence-slicing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-biomarker-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-chipseq-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-genome-engineering-off-target-prediction
Predict CRISPR off-target sites using Cas-OFFinder and CFD scoring algorithms. Identify potential unintended cleavage sites genome-wide and assess guide specificity. Use when evaluating guide RNA specificity or selecting guides with minimal off-target risk.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-crispr-screen-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-hic-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-imc-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-ribo-seq-translation-efficiency
Calculate translation efficiency (TE) as the ratio of ribosome occupancy to mRNA abundance. Use when comparing translational regulation between conditions or identifying genes with altered translation independent of transcription.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-longread-sv-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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single2spatial-spatial-mapping
Map scRNA-seq atlases onto spatial transcriptomics slides using omicverse's Single2Spatial workflow for deep-forest training, spot-level assessment, and marker visualisation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-restriction-fragment-analysis
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-reporting-quarto-reports
FreedomIntelligence/OpenClaw-Medical-Skills 2,009