Topic: codex
8,457 skills in this topic.
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evaluating-code-models
Evaluates code generation models across HumanEval, MBPP, MultiPL-E, and 15+ benchmarks with pass@k metrics. Use when benchmarking code models, comparing coding abilities, testing multi-language support, or measuring code generation quality. Industry standard from BigCode Project used by HuggingFace leaderboards.
foryourhealth111-pixel/Vibe-Skills 1,415
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cancel-ralph
Codex-compatible cancel command for Ralph loop state, preserving the original command name.
foryourhealth111-pixel/Vibe-Skills 1,415
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deepagent-memory-fold
DeepAgent-style memory folding for VCO sessions: compress long context into structured working/tool memory without using episodic-memory.
foryourhealth111-pixel/Vibe-Skills 1,415
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speckit-specify
Create or update feature specifications from natural language descriptions. Use when starting new features or refining requirements. Generates spec.md with user stories, functional requirements, and acceptance criteria following spec-driven development methodology.
foryourhealth111-pixel/Vibe-Skills 1,415
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pathml
Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology slides, H&E stained images, multiplex immunofluorescence (CODEX, Vectra), spatial proteomics, nucleus detection/segmentation, tissue graph construction, or training ML models on pathology data. Supports 160+ slide formats including Aperio SVS, NDPI, DICOM, OME-TIFF for digital pathology workflows.
foryourhealth111-pixel/Vibe-Skills 1,415
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create-plan
Create a concise plan. Use when a user explicitly asks for a plan related to a coding task.
foryourhealth111-pixel/Vibe-Skills 1,415
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tdd-guide
Test-driven development wrapper for vibe coding flow. Enforces RED -> GREEN -> REFACTOR and >=80% coverage target.
foryourhealth111-pixel/Vibe-Skills 1,415
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get-available-resources
This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to use parallel processing (joblib, multiprocessing), out-of-core computing (Dask, Zarr), GPU acceleration (PyTorch, JAX), or memory-efficient strategies. Use this skill before running analyses, training models, processing large datasets, or any task where resource constraints matter.
foryourhealth111-pixel/Vibe-Skills 1,415
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gene-database
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
foryourhealth111-pixel/Vibe-Skills 1,415
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aios-master
AIOS Master Orchestrator & Framework Developer (Orion). Use when you need comprehensive expertise across all domains, framework component creation/modification, workflow orchest...
foryourhealth111-pixel/Vibe-Skills 1,415
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latex-submission-pipeline
LaTeX submission pipeline: templates, local build (latexmk), bibliography (bibtex/biber), lint (chktex), formatting (latexindent), CI build (GitHub Actions), and submission zip packaging.
foryourhealth111-pixel/Vibe-Skills 1,415
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confusion-matrix-generator
Confusion Matrix Generator - Auto-activating skill for ML Training.
Triggers on: confusion matrix generator, confusion matrix generator
Part of the ML Training skill category.
foryourhealth111-pixel/Vibe-Skills 1,415
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pyhealth
Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, drug recommendation), medical coding systems (ICD, NDC, ATC), physiological signals (EEG, ECG), healthcare datasets (MIMIC-III/IV, eICU, OMOP), or implementing deep learning models for healthcare applications (RETAIN, SafeDrug, Transformer, GNN).
foryourhealth111-pixel/Vibe-Skills 1,415
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scikit-bio
Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.
foryourhealth111-pixel/Vibe-Skills 1,415
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speckit-tasks
Break down implementation plans into actionable task lists. Use after planning to create a structured task breakdown. Generates tasks.md with ordered, dependency-aware tasks.
foryourhealth111-pixel/Vibe-Skills 1,415
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code-reviewer
Comprehensive code review skill for TypeScript, JavaScript, Python, Swift, Kotlin, Go. Includes automated code analysis, best practice checking, security scanning, and review checklist generation. Use when reviewing pull requests, providing code feedback, identifying issues, or ensuring code quality standards.
foryourhealth111-pixel/Vibe-Skills 1,415
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pubmed-database
Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.
foryourhealth111-pixel/Vibe-Skills 1,415
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pymc-bayesian-modeling
Compatibility alias for the descriptive PyMC skill name. Delegate to the canonical local `pymc` payload while preserving route and README compatibility.
foryourhealth111-pixel/Vibe-Skills 1,415
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mathematical-logic-expert
Expert in formal logic, model theory, computability, and foundations of mathematics
foryourhealth111-pixel/Vibe-Skills 1,415
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file-organizer
Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.
foryourhealth111-pixel/Vibe-Skills 1,415
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documentation-lookup
This skill should be used when the user asks about libraries, frameworks, API references, or needs code examples. Activates for setup questions, code generation involving libraries, or mentions of specific frameworks like React, Vue, Next.js, Prisma, Supabase, etc.
foryourhealth111-pixel/Vibe-Skills 1,415
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string-database
Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.
foryourhealth111-pixel/Vibe-Skills 1,415
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windows-hook-debugging
Windows环境下Claude Code插件Hook执行错误的诊断与修复。当遇到hook error、cannot execute binary file、.sh regex误匹配、WSL/Git Bash冲突时使用。
foryourhealth111-pixel/Vibe-Skills 1,415
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statistics-math
Statistics, probability, linear algebra, and mathematical foundations for data science
foryourhealth111-pixel/Vibe-Skills 1,415