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Topic: awesome

1,258 skills in this topic.

bulk-rna-seq-deseq2-analysis-with-omicverse Walk Claude through PyDESeq2-based differential expression, including ID mapping, DE testing, fold-change thresholding, and enrichment visualisation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
spatial-statistics
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-genome-assembly-long-read-assembly
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
spatial-preprocessing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-immunoinformatics-tcr-epitope-binding Predict TCR-epitope specificity using ERGO-II and deep learning models for T-cell receptor antigen recognition. Match TCRs to their cognate epitopes or predict TCR targets. Use when analyzing TCR repertoire specificity or identifying antigen-reactive T-cells.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-atac-seq-atac-qc Quality control metrics for ATAC-seq data including fragment size distribution, TSS enrichment, FRiP, and library complexity. Use when assessing ATAC-seq library quality before or after peak calling to identify problematic samples.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
perplexity-search Perform AI-powered web searches with real-time information using Perplexity models via LiteLLM and OpenRouter. This skill should be used when conducting web searches for current information, finding recent scientific literature, getting grounded answers with source citations, or accessing information beyond the model's knowledge cutoff. Provides access to multiple Perplexity models including Sonar Pro, Sonar Pro Search (advanced agentic search), and Sonar Reasoning Pro through a single OpenRouter API key.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-comparative-genomics-hgt-detection
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
spatial-communication
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-immunoinformatics-neoantigen-prediction Identify tumor neoantigens from somatic mutations using pVACtools for personalized cancer immunotherapy. Predict mutant peptides that bind patient HLA and may elicit T-cell responses. Use when identifying vaccine targets or checkpoint inhibitor response biomarkers from tumor sequencing data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-data-visualization-genome-tracks
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
clinical-nlp-extractor
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
spatial-neighbors
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
datacommons-client Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statistics, GDP figures, unemployment rates, disease prevalence, geographic entity resolution, and exploring relationships between statistical entities.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
mcpmed-bioinformatics-server Model Context Protocol (MCP) server for bioinformatics web services like GEO, STRING, and UCSC Cell Browser.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
opentrons-protocol-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
transformers This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks. Use for text generation, classification, question answering, translation, summarization, image classification, object detection, speech recognition, and fine-tuning models on custom datasets.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
simulation-orchestrator Orchestrate multi-simulation campaigns including parameter sweeps, batch jobs, and result aggregation. Use for running parameter studies, managing simulation batches, tracking job status, combining results from multiple runs, or automating simulation workflows.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
string-protein-interaction-analysis-with-omicverse Help Claude query STRING for protein interactions, build PPI graphs with pyPPI, and render styled network figures for bulk gene lists.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
cytokine-storm-analysis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
scikit-learn Machine learning in Python with scikit-learn. Use when working with supervised learning (classification, regression), unsupervised learning (clustering, dimensionality reduction), model evaluation, hyperparameter tuning, preprocessing, or building ML pipelines. Provides comprehensive reference documentation for algorithms, preprocessing techniques, pipelines, and best practices.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-genome-assembly-assembly-polishing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-splicing-quantification Quantifies alternative splicing events (PSI/percent spliced in) from RNA-seq using SUPPA2 from transcript TPM or rMATS-turbo from BAM files. Calculates inclusion levels for skipped exons, alternative splice sites, mutually exclusive exons, and retained introns. Use when measuring splice site usage or isoform ratios from RNA-seq data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clinical-databases-hla-typing Call HLA alleles from NGS data using OptiType, HLA-HD, or arcasHLA for immunogenomics applications. Use when determining HLA genotype for transplant matching, neoantigen prediction, or pharmacogenomic screening.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009