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Topic: awesome

1,258 skills in this topic.

liquid-biopsy-analytics-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
gnomad-database Query gnomAD (Genome Aggregation Database) for population allele frequencies, variant constraint scores (pLI, LOEUF), and loss-of-function intolerance. Essential for variant pathogenicity interpretation, rare disease genetics, and identifying loss-of-function intolerant genes.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clinical-databases-polygenic-risk Calculate polygenic risk scores using PRSice-2, LDpred2, or PRS-CS from GWAS summary statistics. Use when predicting disease risk from genome-wide genetic variants.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-workflows-metabolic-modeling-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
hypothesis-generation Generate testable hypotheses. Formulate from observations, design experiments, explore competing explanations, develop predictions, propose mechanisms, for scientific inquiry across domains.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
single-trajectory-analysis Guide to reproducing OmicVerse trajectory workflows spanning PAGA, Palantir, VIA, velocity coupling, and fate scoring notebooks.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-epidemiological-genomics-variant-surveillance Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-data-visualization-genome-tracks
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-statistical-modeling Perform statistical modeling and regression analysis on biomedical datasets. Supports linear regression, logistic regression (binary/ordinal/multinomial), mixed-effects models, Cox proportional hazards survival analysis, Kaplan-Meier estimation, and comprehensive model diagnostics. Extracts odds ratios, hazard ratios, confidence intervals, p-values, and effect sizes. Designed to solve BixBench statistical reasoning questions involving clinical/experimental data. Use when asked to fit regression models, compute odds ratios, perform survival analysis, run statistical tests, or interpret model coefficients from provided data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
torchdrug Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bulktrajblend-trajectory-interpolation Extend scRNA-seq developmental trajectories with BulkTrajBlend by generating intermediate cells from bulk RNA-seq, training beta-VAE and GNN models, and interpolating missing states.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
ipsae Binder design ranking using ipSAE (interprotein Score from Aligned Errors). Use this skill when: (1) Ranking binder designs for experimental testing, (2) Filtering BindCraft or RFdiffusion outputs, (3) Comparing AF2/AF3/Boltz predictions, (4) Predicting binding success rates, (5) Need better ranking than ipTM or iPAE. For structure prediction, use chai or alphafold. For QC thresholds, use protein-qc.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
cellular-senescence-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
image-analysis
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-genome-assembly-long-read-assembly
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-structural-biology-alphafold-predictions Access and analyze AlphaFold protein structure predictions. Use when predicted structures are needed for proteins without experimental structures, or for confidence scores (pLDDT).
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
openalex-database Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly works. Use for literature searches, research output analysis, citation analysis, and academic database queries.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
docx Comprehensive document creation, editing, and analysis with support for tracked changes, comments, formatting preservation, and text extraction. When Claude needs to work with professional documents (.docx files) for: (1) Creating new documents, (2) Modifying or editing content, (3) Working with tracked changes, (4) Adding comments, or any other document tasks
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-sorting
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
adaptyv Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
simulation-orchestrator Orchestrate multi-simulation campaigns including parameter sweeps, batch jobs, and result aggregation. Use for running parameter studies, managing simulation batches, tracking job status, combining results from multiple runs, or automating simulation workflows.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
statistical-analysis Statistical analysis toolkit. Hypothesis tests (t-test, ANOVA, chi-square), regression, correlation, Bayesian stats, power analysis, assumption checks, APA reporting, for academic research.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
clinical-nlp-extractor
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-reporting-figure-export
FreedomIntelligence/OpenClaw-Medical-Skills 2,009