Topic: ai-agents
18,135 skills in this topic.
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kegg-database
Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.
x-cmd/skill 19
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webapp-testing
Toolkit for interacting with and testing local web applications using Playwright. Supports verifying frontend functionality, debugging UI behavior, capturing browser screenshots, and viewing browser logs.
x-cmd/skill 19
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onsh
Enhanced interface for xonsh, providing x-cmd integration, documentation search, and AI capabilities. Core Scenario: When the user needs to integrate x-cmd with xonsh or search xonsh documentation via CLI.
x-cmd/skill 19
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gh
Enhanced GitHub CLI for managing repositories, issues, PRs, actions, and GitHub Models. Core Scenario: When the user needs to automate GitHub workflows, manage secrets, or use GitHub's AI models via CLI.
x-cmd/skill 19
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jq
Lightweight and flexible JSON processor. Core Scenario: When the AI needs to filter, transform, format, or extract JSON data in the terminal. x-cmd version provides zero-dependency auto-installation.
x-cmd/skill 19
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latchbio-integration
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration.
x-cmd/skill 19
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clinpgx-database
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
x-cmd/skill 19
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rg
Modern, high-speed line-oriented search tool (ripgrep) with an interactive FZF interface. Core Scenario: When the user needs to perform recursive text searches in large codebases or directories.
x-cmd/skill 19
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uptime
Display system uptime and load averages in structured YAML format. Core Scenario: When the user needs to check system busy state (load) or total runtime in a script-friendly format.
x-cmd/skill 19
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nu
Enhanced interface for Nushell, enabling x-cmd integration, documentation search, and AI-powered command generation. Core Scenario: When the user needs to set up x-cmd in Nushell or search Nushell documentation via CLI.
x-cmd/skill 19
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markitdown
Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.
x-cmd/skill 19
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zarr-python
Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.
x-cmd/skill 19
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web-artifacts-builder
Suite of tools for creating elaborate, multi-component claude.ai HTML artifacts using modern frontend web technologies (React, Tailwind CSS, shadcn/ui). Use for complex artifacts requiring state management, routing, or shadcn/ui components - not for simple single-file HTML/JSX artifacts.
x-cmd/skill 19
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clinicaltrials-database
Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
x-cmd/skill 19
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paper-2-web
This skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference posters (Paper2Poster). Use this skill for tasks involving paper dissemination, conference preparation, creating explorable academic homepages, generating video abstracts, or producing print-ready posters from LaTeX or PDF sources.
x-cmd/skill 19
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qiskit
IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimization tools. Best for IBM hardware execution, quantum error mitigation, and enterprise quantum computing. For Google hardware use cirq; for gradient-based quantum ML use pennylane; for open quantum system simulations use qutip.
x-cmd/skill 19
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adaptyv
Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
x-cmd/skill 19
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npx
Enhanced interface for npx, used to execute Node.js packages without local installation. Core Scenario: When the user needs to run a one-off Node.js tool or test a package.
x-cmd/skill 19
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research-grants
Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader impacts, significance statements, innovation narratives, and compliance with submission requirements.
x-cmd/skill 19
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raku
Enhanced Raku language module for executing Raku (formerly Perl 6) scripts. Core Scenario: When the user needs to run Raku scripts or manage the Raku environment.
x-cmd/skill 19
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uname
Enhanced system information display with structured key-value output. Core Scenario: When the user needs a quick, readable summary of kernel version, architecture, and OS name.
x-cmd/skill 19
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zig
Enhanced Zig language module for package management, project building, and ZON format conversion. Core Scenario: When the user needs to manage Zig projects, convert ZON to JSON/YAML, or initialize C compilation with Zig.
x-cmd/skill 19
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dask
Distributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best for parallel file processing, distributed ML, integration with existing pandas code. For out-of-core analytics on single machine use vaex; for in-memory speed use polars.
x-cmd/skill 19
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datacommons-client
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statistics, GDP figures, unemployment rates, disease prevalence, geographic entity resolution, and exploring relationships between statistical entities.
x-cmd/skill 19