Agent skills
Skills you can use with AI coding agents, indexed from public GitHub repositories.
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bio-splicing-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-multi-omics-similarity-network
Similarity Network Fusion (SNF) for patient stratification using multi-omics data. Integrates multiple data types into a unified patient similarity network. Use when performing patient stratification or integrating multi-omics data into unified similarity networks.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-data-visualization-ggplot2-fundamentals
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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search-strategy
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-crispr-screens-base-editing-analysis
Analyzes base editing and prime editing outcomes including editing efficiency, bystander edits, and indel frequencies. Use when quantifying CRISPR base editor results, comparing ABE vs CBE efficiency, or assessing prime editing fidelity.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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simpy
Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with processes, queues, resources, and time-based events such as manufacturing systems, service operations, network traffic, logistics, or any system where entities interact with shared resources over time.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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dnanexus-integration
DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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pdx-model-analysis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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pan-cancer-multiomics-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-entrez-search
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-clinical-databases-hla-typing
Call HLA alleles from NGS data using OptiType, HLA-HD, or arcasHLA for immunogenomics applications. Use when determining HLA genotype for transplant matching, neoantigen prediction, or pharmacogenomic screening.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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opentargets-database
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for therapeutic target identification.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-read-alignment-star-alignment
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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tooluniverse-infectious-disease
Rapid pathogen characterization and drug repurposing analysis for infectious disease outbreaks. Identifies pathogen taxonomy, essential proteins, predicts structures, and screens existing drugs via docking. Use when facing novel pathogens, emerging infections, or needing rapid therapeutic options during outbreaks.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-population-genetics-association-testing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-immunoinformatics-neoantigen-prediction
Identify tumor neoantigens from somatic mutations using pVACtools for personalized cancer immunotherapy. Predict mutant peptides that bind patient HLA and may elicit T-cell responses. Use when identifying vaccine targets or checkpoint inhibitor response biomarkers from tumor sequencing data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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adaptyv
Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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cnv-caller-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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goal-analyzer
分析健康目标数据、识别目标模式、评估目标进度,并提供个性化目标管理建议。支持与营养、运动、睡眠等健康数据的关联分析。
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-sequence-similarity
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-alignment-sorting
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-long-read-sequencing-clair3-variants
Deep learning-based variant calling from long reads using Clair3 for SNPs and small indels. Use when calling germline variants from ONT or PacBio alignments, particularly when high accuracy is needed for clinical or research applications.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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geopandas
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transformations, spatial joins, overlay operations, choropleth mapping, or any task involving reading/writing/analyzing vector geographic data. Supports PostGIS databases, interactive maps, and integration with matplotlib/folium/cartopy. Use for tasks like buffer analysis, spatial joins between datasets, dissolving boundaries, clipping data, calculating areas/distances, reprojecting coordinate systems, creating maps, or converting between spatial file formats.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-genome-engineering-base-editing-design
Design guides for cytosine and adenine base editing using editing window optimization and BE-Hive outcome prediction. Select optimal positions for C-to-T or A-to-G conversions without double-strand breaks. Use when designing base editor experiments for precise nucleotide changes.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009