ReddRadar
Topic: computational-research
34 skills in this topic.
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enrich
Enrich paper metadata using LLM extraction. Extract table of contents (TOC), conclusions (L3), and backfill abstracts. Use when the user wants to extract conclusions, build TOC, or backfill missing abstracts. For citation count updates, see the /citations skill.
ZimoLiao/scholaraio 332
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explore
Explore literature by fetching papers from OpenAlex with multi-dimensional filters (ISSN, concept, author, institution, keyword, etc.), building local embeddings, running BERTopic clustering, and multi-mode search (semantic/keyword/unified). Data is isolated in data/explore/<name>/. Use when the user wants to survey a journal, explore a research field, analyze an author's output, or do landscape analysis.
ZimoLiao/scholaraio 332
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arxiv
Use when the user wants to browse arXiv preprints, search arXiv directly, fetch a PDF by arXiv ID or URL, or send a preprint straight into the ingest pipeline.
ZimoLiao/scholaraio 332
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graph
Query citation graphs — view a paper's references, find which papers cite it, and analyze shared references between multiple papers. Use when the user asks about citation relationships, reference overlap, or bibliographic connections.
ZimoLiao/scholaraio 332
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gromacs
Use when working on biomolecular molecular dynamics with GROMACS, especially system setup, equilibration, production runs, trajectory analysis, or MM/PBSA-style post-processing.
ZimoLiao/scholaraio 332
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import
Import papers from external reference managers (Endnote XML/RIS, Zotero Web API or local SQLite), or attach a PDF to an existing paper. Handles PDF matching, MinerU conversion, metadata enrichment, and index updates. Use when the user wants to import their existing library from Zotero, Endnote, attach/add a PDF to a paper, or supplement a paper with its PDF.
ZimoLiao/scholaraio 332
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index
Rebuild FTS5 full-text search index or FAISS semantic vector index. Use when the user wants to update or rebuild search indexes after metadata changes.
ZimoLiao/scholaraio 332
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ingest
Use when the user wants to process new papers, patents, theses, documents, or proceedings from inbox into the knowledge base, run the ingest pipeline, or rebuild indexes.
ZimoLiao/scholaraio 332
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insights
Analyze research behavior data — search hot keywords, most-read papers, reading trends, and semantic neighbors you haven't read yet. Use when the user wants to understand their reading habits, discover overlooked papers, or review recent research activity.
ZimoLiao/scholaraio 332
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lammps
Use when working on classical materials simulations with LAMMPS, especially interatomic-potential selection, shock or deformation setups, thermodynamic runs, and structure analysis for solids or nanomaterials.
ZimoLiao/scholaraio 332