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Agent skills
collection

Topic: collection

1,995 skills in this topic.

deeptools NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.
Microck/ordinary-claude-skills 152
denario Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, executing computational experiments, performing literature searches, or generating publication-ready papers in LaTeX format. Supports end-to-end research pipelines with customizable agent orchestration.
Microck/ordinary-claude-skills 152
diffdock Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction.
Microck/ordinary-claude-skills 152
dnanexus-integration DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
Microck/ordinary-claude-skills 152
drugbank-database Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.
Microck/ordinary-claude-skills 152
ena-database Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
Microck/ordinary-claude-skills 152
web-research Use this skill for requests related to web research; it provides a structured approach to conducting comprehensive web research
Microck/ordinary-claude-skills 152
writing-plans Use when design is complete and you need detailed implementation tasks for engineers with zero codebase context - creates comprehensive implementation plans with exact file paths, complete code examples, and verification steps assuming engineer has minimal domain knowledge
Microck/ordinary-claude-skills 152
web-research Use this skill for requests related to web research; it provides a structured approach to conducting comprehensive web research
Microck/ordinary-claude-skills 152
skill-writer Guide users through creating Agent Skills for Claude Code. Use when the user wants to create, write, author, or design a new Skill, or needs help with SKILL.md files, frontmatter, or skill structure.
Microck/ordinary-claude-skills 152
skill-share A skill that creates new Claude skills and automatically shares them on Slack using Rube for seamless team collaboration and skill discovery.
Microck/ordinary-claude-skills 152
Skill Development This skill should be used when the user wants to "create a skill", "add a skill to plugin", "write a new skill", "improve skill description", "organize skill content", or needs guidance on skill structure, progressive disclosure, or skill development best practices for Claude Code plugins.
Microck/ordinary-claude-skills 152
skill-creator Guide for creating effective skills. This skill should be used when users want to create a new skill (or update an existing skill) that extends Claude's capabilities with specialized knowledge, workflows, or tool integrations.
Microck/ordinary-claude-skills 152
Skill Builder Create new Claude Code Skills with proper YAML frontmatter, progressive disclosure structure, and complete directory organization. Use when you need to build custom skills for specific workflows, generate skill templates, or understand the Claude Skills specification.
Microck/ordinary-claude-skills 152
research Research libraries, APIs, and patterns using searchGitHub and Exa tools. Finds real-world implementations and saves structured reports to docs/research/. Use when investigating technologies, debugging issues, or comparing options.
Microck/ordinary-claude-skills 152
ReasoningBank Intelligence Implement adaptive learning with ReasoningBank for pattern recognition, strategy optimization, and continuous improvement. Use when building self-learning agents, optimizing workflows, or implementing meta-cognitive systems.
Microck/ordinary-claude-skills 152
positron-issue-creator This skill should be used when drafting GitHub issues for the Positron repository. It provides workflows for searching duplicates, selecting appropriate labels, gathering complete context through questioning, and writing terse, fluff-free issues that precisely describe what is needed or wrong. The skill prepares issues for manual submission by the user. Use this skill when the user asks to draft or prepare an issue for Positron.
Microck/ordinary-claude-skills 152
positron-intake-rotation This skill should be used when handling issue intake rotation duties for the Positron repository. It provides workflows for reviewing and organizing new issues, responding to discussions, handling support tickets, and searching for related content. Use this skill when on intake rotation duty, when helping someone with intake tasks, or when learning the intake rotation process.
Microck/ordinary-claude-skills 152
langgraph-docs Use this skill for requests related to LangGraph in order to fetch relevant documentation to provide accurate, up-to-date guidance.
Microck/ordinary-claude-skills 152
file-organizer Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.
Microck/ordinary-claude-skills 152
debugging-strategies Master systematic debugging techniques, profiling tools, and root cause analysis to efficiently track down bugs across any codebase or technology stack. Use when investigating bugs, performance issues, or unexpected behavior.
Microck/ordinary-claude-skills 152
create-skill-file Guides Claude in creating well-structured SKILL.md files following best practices. Provides clear guidelines for naming, structure, and content organization to make skills easy to discover and execute.
Microck/ordinary-claude-skills 152
gpt5-consultant Use this skill when stuck in circular debugging, when solutions aren't working despite multiple attempts, or when the user expresses frustration with lack of progress. Bring in GPT-5 as a third-party consultant to provide fresh perspective on complex technical problems, architectural decisions, or multi-system debugging issues. Ideal when you've tried multiple approaches without success, when the problem involves obscure edge cases or novel challenges, or when a second expert opinion would help break through an impasse. Gather all context from the conversation so far and present it comprehensively to GPT-5.
Microck/ordinary-claude-skills 152
create-skill Guide for creating effective skills. This skill should be used when users want to create a new skill (or update an existing skill) that extends your capabilities with specialized knowledge, workflows, or tool integrations.
Microck/ordinary-claude-skills 152