Topic: claude-skills
11,948 skills in this topic.
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markdown-mermaid-writing
Comprehensive markdown and Mermaid diagram writing skill that establishes text-based diagrams as the DEFAULT documentation standard. Use this skill when creating ANY scientific document, report, analysis, or visualization — it ensures all outputs are in version-controlled, token-efficient markdown with embedded Mermaid diagrams as the source of truth, with clear pathways to downstream Python or AI-generated images. Includes full style guides (markdown + mermaid), 24 diagram type references, and 9 document templates ready to use.
foryourhealth111-pixel/Vibe-Skills 1,415
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aios-po
Product Owner (Pax). Use for backlog management, story refinement, acceptance criteria, sprint planning, and prioritization decisions
foryourhealth111-pixel/Vibe-Skills 1,415
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diffdock
Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction.
foryourhealth111-pixel/Vibe-Skills 1,415
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ensembl-database
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
foryourhealth111-pixel/Vibe-Skills 1,415
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Verification & Quality Assurance
Comprehensive truth scoring, code quality verification, and automatic rollback system with 0.95 accuracy threshold for ensuring high-quality agent outputs and codebase reliability.
foryourhealth111-pixel/Vibe-Skills 1,415
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data-exploration-visualization
自动化数据探索和可视化工具，提供从数据加载到专业报告生成的完整EDA解决方案。支持多种图表类型、智能数据诊断、建模评估和HTML报告生成。适用于医疗、金融、电商等领域的数据分析项目。
foryourhealth111-pixel/Vibe-Skills 1,415
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commit-with-reflection
Git提交与调试反思报告生成技能。自动分析开发过程中的错误、调试步骤和解决方案,生成结构化的中文反思报告,并创建包含报告引用的Git提交。触发词:反思提交、智能提交、生成调试报告、commit with reflection。
foryourhealth111-pixel/Vibe-Skills 1,415
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qiskit
IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimization tools. Best for IBM hardware execution, quantum error mitigation, and enterprise quantum computing. For Google hardware use cirq; for gradient-based quantum ML use pennylane; for open quantum system simulations use qutip.
foryourhealth111-pixel/Vibe-Skills 1,415
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speckit-plan
Generate technical implementation plans from feature specifications. Use after creating a spec to define architecture, tech stack, and implementation phases. Creates plan.md with detailed technical design.
foryourhealth111-pixel/Vibe-Skills 1,415
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shap
Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force, heatmap), debugging models, analyzing model bias or fairness, comparing models, or implementing explainable AI. Works with tree-based models (XGBoost, LightGBM, Random Forest), deep learning (TensorFlow, PyTorch), linear models, and any black-box model.
foryourhealth111-pixel/Vibe-Skills 1,415
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pdf
PDF manipulation toolkit. Extract text/tables, create PDFs, merge/split, fill forms, for programmatic document processing and analysis.
foryourhealth111-pixel/Vibe-Skills 1,415
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uniprot-database
Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniProt-specific control.
foryourhealth111-pixel/Vibe-Skills 1,415
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opentargets-database
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for therapeutic target identification.
foryourhealth111-pixel/Vibe-Skills 1,415
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training-machine-learning-models
Build train machine learning models with automated workflows. Analyzes datasets, selects model types (classification, regression), configures parameters, trains with cross-validation, and saves model artifacts. Use when asked to "train model" or "evalua... Trigger with relevant phrases based on skill purpose.
foryourhealth111-pixel/Vibe-Skills 1,415
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evals-context
Provides context about the Roo Code evals system structure in this monorepo. Use when tasks mention "evals", "evaluation", "eval runs", "eval exercises", or working with the evals infrastructure. Helps distinguish between the evals execution system (packages/evals, apps/web-evals) and the public website evals display page (apps/web-roo-code/src/app/evals).
foryourhealth111-pixel/Vibe-Skills 1,415
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security-reviewer
Security review wrapper for vibe review flow. Detects OWASP-style risks, secret leaks, auth flaws, and unsafe input handling.
foryourhealth111-pixel/Vibe-Skills 1,415
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rowan
Cloud-based quantum chemistry platform with Python API. Preferred for computational chemistry workflows including pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2). Use when tasks involve quantum chemistry calculations, molecular property prediction, DFT or semiempirical methods, neural network potentials (AIMNet2), protein-ligand binding predictions, or automated computational chemistry pipelines. Provides cloud compute resources with no local setup required.
foryourhealth111-pixel/Vibe-Skills 1,415
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scientific-reporting
Write research/technical reports with strong structure + figure standards. Supports Markdown/HTML/PDF outputs (Quarto optional), executive summary, methods, results, discussion, and reproducibility appendix.
foryourhealth111-pixel/Vibe-Skills 1,415
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pptx
Presentation toolkit (.pptx). Create/edit slides, layouts, content, speaker notes, comments, for programmatic presentation creation and modification.
foryourhealth111-pixel/Vibe-Skills 1,415
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gh-address-comments
Help address review/issue comments on the open GitHub PR for the current branch using gh CLI; verify gh auth first and prompt the user to authenticate if not logged in.
foryourhealth111-pixel/Vibe-Skills 1,415
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clinicaltrials-database
Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
foryourhealth111-pixel/Vibe-Skills 1,415
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adaptyv
Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
foryourhealth111-pixel/Vibe-Skills 1,415
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feature-importance-analyzer
Feature Importance Analyzer - Auto-activating skill for ML Training.
Triggers on: feature importance analyzer, feature importance analyzer
Part of the ML Training skill category.
foryourhealth111-pixel/Vibe-Skills 1,415
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torchdrug
Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs.
foryourhealth111-pixel/Vibe-Skills 1,415