Agent skills
claude-code

Topic: claude-code

35,830 skills in this topic.

string-database Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.
x-cmd/skill 19
sympy Use this skill when working with symbolic mathematics in Python. This skill should be used for symbolic computation tasks including solving equations algebraically, performing calculus operations (derivatives, integrals, limits), manipulating algebraic expressions, working with matrices symbolically, physics calculations, number theory problems, geometry computations, and generating executable code from mathematical expressions. Apply this skill when the user needs exact symbolic results rather than numerical approximations, or when working with mathematical formulas that contain variables and parameters.
x-cmd/skill 19
torch-geometric Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning.
x-cmd/skill 19
treatment-plans Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management. Includes SMART goal frameworks, evidence-based interventions with minimal text citations, regulatory compliance (HIPAA), and professional formatting. Prioritizes brevity and clinical actionability.
x-cmd/skill 19
vaex Use this skill for processing and analyzing large tabular datasets (billions of rows) that exceed available RAM. Vaex excels at out-of-core DataFrame operations, lazy evaluation, fast aggregations, efficient visualization of big data, and machine learning on large datasets. Apply when users need to work with large CSV/HDF5/Arrow/Parquet files, perform fast statistics on massive datasets, create visualizations of big data, or build ML pipelines that do not fit in memory.
x-cmd/skill 19
venue-templates Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant proposals (NSF, NIH, DOE, DARPA). This skill should be used when preparing manuscripts for journal submission, conference papers, research posters, or grant proposals and need venue-specific formatting requirements and templates.
x-cmd/skill 19
zinc-database Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for docking, analog discovery, for virtual screening and drug discovery.
x-cmd/skill 19
askme Verbalized Sampling (VS) protocol for deep intent exploration before planning. Use when starting ambiguous or complex tasks, when multiple interpretations exist, or when you need to explore diverse intent hypotheses and ask maximum clarifying questions before committing to an approach.
OutlineDriven/odin-claude-plugin 17
ast-grep Effective code search, analysis, and refactoring using ast-grep (sg). Use this skill for precise AST-based code modifications, structural search, and linting.
OutlineDriven/odin-claude-plugin 17
contexts Coordinate context sweep before coding - gather relevant files, patterns, and tooling summaries. Use when preparing to implement a feature, fix, or refactor and need comprehensive architecture, pattern, tooling, and dependency context gathered first.
OutlineDriven/odin-claude-plugin 17
design-by-contract Design-by-Contract (DbC) development - design contracts from requirements, then execute CREATE -> VERIFY -> TEST cycle. Use when implementing with formal preconditions, postconditions, and invariants across any language.
OutlineDriven/odin-claude-plugin 17
gh-address-comments Help address review/issue comments on the open GitHub PR for the current branch using gh CLI; verify gh auth first and prompt the user to authenticate if not logged in.
OutlineDriven/odin-claude-plugin 17
gh-fix-ci Inspect GitHub PR checks with gh, pull failing GitHub Actions logs, summarize failure context, then create a fix plan and implement after user approval. Use when a user asks to debug or fix failing PR CI/CD checks on GitHub Actions and wants a plan + code changes; for external checks (e.g., Buildkite), only report the details URL and mark them out of scope.
OutlineDriven/odin-claude-plugin 17
inits Analyze a codebase and create or improve an AGENTS.md file for future agent instances. Use when onboarding to a repository and capturing hard-to-rediscover conventions, constraints, and rationale.
OutlineDriven/odin-claude-plugin 17
parallel-launch Decompose a task into independent concerns and execute them through broadly parallel, specialized agent groups. Use when a request involves multiple independent sub-tasks, research across separate domains, or work that can be parallelized across files or modules.
OutlineDriven/odin-claude-plugin 17
plans Software architect and planning specialist - conduct thorough read-only planning before any action. Use when exploring a codebase to design implementation plans, defining objectives, gathering relevant files, and summarizing available tools before coding begins.
OutlineDriven/odin-claude-plugin 17
pr-merge-base Merge one or more PRs into the base branch with queue-like sequencing and conflict resolution. Use when merging PRs that may conflict with each other or the base, requiring ordered application and intelligent conflict handling.
OutlineDriven/odin-claude-plugin 17
pr-merge-temporal Merge multiple PRs into a temporal integration branch before merging to base, with ordered conflict resolution. Use when you want to validate a set of PRs together on a staging branch before advancing the base branch.
OutlineDriven/odin-claude-plugin 17
pr-reviews Review code changes on a given GitHub PR using gh CLI. Use when the user asks to review a pull request, analyze PR diffs, or provide feedback on open PRs with structured quality, security, and testing assessments.
OutlineDriven/odin-claude-plugin 17
proceed Execute an implementation plan with surgical precision. Use after a planning phase (plan-now or similar) has produced a step-by-step strategy and identified critical files. Focuses on precise code changes with verification at each step.
OutlineDriven/odin-claude-plugin 17
proof-driven Proof-driven development - design proofs from requirements, then execute CREATE -> VERIFY -> REMEDIATE cycle. Use when implementing with formal verification using property-based testing, theorem proving, or proof tactics; zero unproven property policy enforced.
OutlineDriven/odin-claude-plugin 17
refactor-break-bw-compat Refactor by removing backward compatibility and legacy layers. Use when modernizing APIs, cleaning up migration debt, removing compat shims, or eliminating stale feature flags.
OutlineDriven/odin-claude-plugin 17
resolve Resolve code review comments by verifying their validity and proposing multiple solutions for confirmed issues. Use when addressing review feedback, analyzing whether review comments are valid, and generating architectural solutions (not naive fixes) for confirmed issues.
OutlineDriven/odin-claude-plugin 17
reviews Review the code changes on the current branch. Use when the user asks to review their current work, analyze recent commits, or get a code quality assessment of the active branch against the main branch.
OutlineDriven/odin-claude-plugin 17