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Topic: awesome

1,258 skills in this topic.

bio-population-genetics-plink-basics
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-pathway-reactome Reactome pathway enrichment using ReactomePA package. Use when analyzing gene lists against Reactome's curated peer-reviewed pathway database. Performs over-representation analysis and GSEA with visualization and pathway hierarchy exploration.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-chemical-compound-retrieval Retrieves chemical compound information from PubChem and ChEMBL with disambiguation, cross-referencing, and quality assessment. Creates comprehensive compound profiles with identifiers, properties, bioactivity, and drug information. Use when users need chemical data, drug information, or mention PubChem CID, ChEMBL ID, SMILES, InChI, or compound names.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-microbiome-functional-prediction Predict metagenome functional content from 16S rRNA marker gene data using PICRUSt2. Infer KEGG, MetaCyc, and EC abundances from ASV tables. Use when functional profiling is needed from 16S data without shotgun metagenomics sequencing.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
crisis-detection-intervention-ai Detect crisis signals in user content using NLP, mental health sentiment analysis, and safe intervention protocols. Implements suicide ideation detection, automated escalation, and crisis resource integration. Use for mental health apps, recovery platforms, support communities. Activate on "crisis detection", "suicide prevention", "mental health NLP", "intervention protocol". NOT for general sentiment analysis, medical diagnosis, or replacing professional help.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-disease-research Generate comprehensive disease research reports using 100+ ToolUniverse tools. Creates a detailed markdown report file and progressively updates it with findings from 10 research dimensions. All information includes source references. Use when users ask about diseases, syndromes, or need systematic disease analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
adhd-daily-planner Time-blind friendly planning, executive function support, and daily structure for ADHD brains. Specializes in realistic time estimation, dopamine-aware task design, and building systems that actually work for neurodivergent minds.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-microbiome-amplicon-processing Amplicon sequence variant (ASV) inference from 16S rRNA or ITS amplicon sequencing using DADA2. Covers quality filtering, error learning, denoising, and chimera removal. Use when processing demultiplexed amplicon FASTQ files to generate an ASV table for downstream analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clinical-databases-somatic-signatures Extract and analyze mutational signatures from somatic variants using SigProfiler or MutationalPatterns to characterize mutagenic processes. Use when identifying DNA damage mechanisms or etiology in cancer genomes.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-local-blast
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
data-viz-plots Create publication-quality plots and visualizations using matplotlib and seaborn. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-cancer-variant-interpretation Provide comprehensive clinical interpretation of somatic mutations in cancer. Given a gene symbol + variant (e.g., EGFR L858R, BRAF V600E) and optional cancer type, performs multi-database analysis covering clinical evidence (CIViC), mutation prevalence (cBioPortal), therapeutic associations (OpenTargets, ChEMBL, FDA), resistance mechanisms, clinical trials, prognostic impact, and pathway context. Generates an evidence-graded markdown report with actionable recommendations for precision oncology. Use when oncologists, molecular tumor boards, or researchers ask about treatment options for specific cancer mutations, resistance mechanisms, or clinical trial matching.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
using-git-worktrees Use when starting feature work that needs isolation from current workspace or before executing implementation plans - creates isolated git worktrees with smart directory selection and safety verification
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-population-genetics-population-structure
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-workflows-crispr-editing-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
regulatory-drafter
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
prs-net-deep-learning-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-gene-enrichment Perform comprehensive gene enrichment and pathway analysis using gseapy (ORA and GSEA), PANTHER, STRING, Reactome, and 40+ ToolUniverse tools. Supports GO enrichment (BP, MF, CC), KEGG, Reactome, WikiPathways, MSigDB Hallmark, and 220+ Enrichr libraries. Handles multiple ID types (gene symbols, Ensembl, Entrez, UniProt), multiple organisms (human, mouse, rat, fly, worm, yeast), customizable backgrounds, and multiple testing correction (BH, Bonferroni). Use when users ask about gene enrichment, pathway analysis, GO term enrichment, KEGG pathway analysis, GSEA, over-representation analysis, functional annotation, or gene set analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-small-rna-seq-target-prediction
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-read-qc-quality-filtering Filter reads by quality scores, length, and N content using Trimmomatic and fastp. Apply sliding window trimming, remove low-quality bases from read ends, and discard reads below thresholds. Use when reads have poor quality tails or require minimum quality for downstream analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-atac-seq-nucleosome-positioning Extract nucleosome positions from ATAC-seq data using NucleoATAC, ATACseqQC, and fragment analysis. Use when analyzing chromatin organization, identifying nucleosome-free regions at promoters, or characterizing nucleosome occupancy patterns from ATAC-seq fragment size distributions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-indexing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tcr-repertoire-analysis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
cobrapy Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009