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Topic: awesome

1,258 skills in this topic.

verification-before-completion Use when about to claim work is complete, fixed, or passing, before committing or creating PRs - requires running verification commands and confirming output before making any success claims; evidence before assertions always
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-clinical-guidelines Search and retrieve clinical practice guidelines across 12+ authoritative sources including NICE, WHO, ADA, AHA/ACC, NCCN, SIGN, CPIC, CMA, CTFPHC, GIN, MAGICapp, PubMed, EuropePMC, TRIP, and OpenAlex. Covers disease management, cardiology, oncology, diabetes, pharmacogenomics, and more. Use when users ask about clinical guidelines, treatment recommendations, standard of care, evidence-based medicine, or drug-gene dosing recommendations.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pydeseq2 Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
data-visualization-expert
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-immunoinformatics-immunogenicity-scoring Score and prioritize neoantigens and epitopes for immunogenicity using multi-factor models combining MHC binding, processing, expression, and sequence features. Rank candidates for vaccine design. Use when prioritizing epitopes for vaccine development or identifying the most immunogenic neoantigens.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-comparative-genomics-synteny-analysis
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
variant-calling
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-hi-c-analysis-compartment-analysis Detect A/B compartments from Hi-C data using cooltools and eigenvector decomposition. Identify active (A) and inactive (B) chromatin compartments from contact matrices. Use when identifying A/B compartments from Hi-C data.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pymoo Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pysam Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-phylo-tree-io
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
vcf-manipulation
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-molecular-descriptors Calculates molecular descriptors and fingerprints using RDKit. Computes Morgan fingerprints (ECFP), MACCS keys, Lipinski properties, QED drug-likeness, TPSA, and 3D conformer descriptors. Use when featurizing molecules for machine learning or filtering by drug-likeness criteria.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
vcf-basics
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
scrna-qc
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
brenda-database Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
filtering-best-practices
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bone-marrow-ai-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
deepchem Molecular machine learning toolkit. Property prediction (ADMET, toxicity), GNNs (GCN, MPNN), MoleculeNet benchmarks, pretrained models, featurization, for drug discovery ML.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-molecular-io Reads, writes, and converts molecular file formats (SMILES, SDF, MOL2, PDB) using RDKit and Open Babel. Handles structure parsing, canonicalization, and full standardization pipeline including sanitization, normalization, and tautomer canonicalization. Use when loading chemical libraries, converting formats, or preparing molecules for analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-epitranscriptomics-m6a-peak-calling
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
varCADD
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-experimental-design-sample-size
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-microbiome-qiime2-workflow QIIME2 command-line workflow for 16S/ITS amplicon analysis. Alternative to DADA2/phyloseq R workflow with built-in provenance tracking. Use when preferring CLI over R, needing reproducible provenance, or working within QIIME2 ecosystem.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009