Agent skill
coagulation-thrombosis-agent
Install this agent skill to your Project
npx add-skill https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/coagulation-thrombosis-agent
SKILL.md
name: 'coagulation-thrombosis-agent' description: 'AI-powered analysis of coagulation disorders, thrombosis risk prediction, anticoagulation management, and platelet function assessment using machine learning.' measurable_outcome: Execute skill workflow successfully with valid output within 15 minutes. allowed-tools:
- read_file
- run_shell_command
Coagulation and Thrombosis Agent
The Coagulation and Thrombosis Agent provides AI-driven analysis of hemostatic disorders, thrombosis risk assessment, and anticoagulation management. It integrates coagulation cascade modeling, platelet function analysis, and machine learning for personalized thrombosis prevention.
When to Use This Skill
- When assessing venous thromboembolism (VTE) risk in hospitalized patients.
- For anticoagulation dose optimization (warfarin, DOACs).
- To analyze coagulation panel results and identify bleeding/clotting disorders.
- For platelet morphology and function assessment.
- When managing thrombosis in myeloproliferative neoplasms (MPNs).
Core Capabilities
-
VTE Risk Prediction: Machine learning models predict deep vein thrombosis (DVT) and pulmonary embolism (PE) risk using clinical and laboratory features.
-
Anticoagulation Optimization: AI-guided dosing for warfarin (incorporating pharmacogenomics) and monitoring for DOACs.
-
Coagulation Cascade Analysis: Interprets PT, aPTT, fibrinogen, D-dimer, and specialized assays to diagnose coagulopathies.
-
Platelet Analysis: CNN-based morphology analysis predicting bleeding and thrombosis risk from peripheral smear images.
-
DIC Scoring: Automated disseminated intravascular coagulation (DIC) scoring and monitoring.
-
MPN Thrombosis Risk: Specialized models for thrombosis prediction in polycythemia vera, essential thrombocythemia.
Workflow
-
Input: Coagulation lab results, patient demographics, clinical risk factors, platelet images (optional).
-
Risk Assessment: Apply ML models for VTE, bleeding, or DIC risk scores.
-
Dosing Optimization: Generate anticoagulation recommendations.
-
Monitoring: Track INR/anti-Xa trends and alert on deviations.
-
Diagnosis: Pattern recognition for coagulation disorders.
-
Output: Risk scores, dosing recommendations, diagnostic suggestions, monitoring alerts.
Example Usage
User: "Calculate VTE risk for this hospitalized patient and optimize LMWH prophylaxis."
Agent Action:
python3 Skills/Hematology/Coagulation_Thrombosis_Agent/thrombosis_analyzer.py \
--patient_data patient_demographics.json \
--labs coagulation_panel.csv \
--risk_model improved_padua \
--anticoagulant lmwh \
--renal_function egfr_45 \
--output vte_assessment.json
Risk Models Implemented
| Model | Application | Key Features |
|---|---|---|
| Padua (Enhanced) | Medical VTE risk | 11 clinical factors + ML enhancement |
| Caprini (AI) | Surgical VTE risk | 40+ factors with ML weighting |
| CHADS2-VASc | Atrial fibrillation stroke risk | Standard guideline scoring |
| HAS-BLED | Anticoagulation bleeding risk | Major bleeding prediction |
| IPSET-thrombosis | MPN thrombosis | JAK2, age, prior thrombosis |
Coagulation Panel Interpretation
| Test | Normal Range | Elevations Suggest | Decreases Suggest |
|---|---|---|---|
| PT/INR | 11-13.5s / 0.9-1.1 | Warfarin, VII def, liver disease | - |
| aPTT | 25-35s | Heparin, VIII/IX/XI def, lupus AC | - |
| Fibrinogen | 200-400 mg/dL | Acute phase, inflammation | DIC, liver disease |
| D-dimer | <500 ng/mL | VTE, DIC, inflammation | - |
| Platelet | 150-400K | Reactive, MPN | ITP, marrow failure |
AI/ML Components
Deep Learning for Platelet Morphology:
- CNN analysis of peripheral smear images
- Identifies giant platelets, platelet clumps, hypogranular forms
- Predicts bleeding/thrombosis risk from morphology
VTE Prediction Models:
- Gradient boosting (XGBoost) on structured EHR data
- Incorporates labs, vitals, medications, procedures
- AUC > 0.85 for hospital-acquired VTE
Anticoagulation Dosing:
- Reinforcement learning for INR control
- Pharmacogenomic integration (CYP2C9, VKORC1)
- Real-time dose adjustment recommendations
Prerequisites
- Python 3.10+
- scikit-learn, XGBoost, PyTorch
- HL7 FHIR client (for EHR integration)
- Image analysis libraries (for platelet morphology)
Related Skills
- Flow_Cytometry_AI - For platelet function assays
- Pharmacogenomics_Agent - For anticoagulant pharmacogenomics
- Blood_Smear_Analysis - For morphology assessment
Clinical Applications
- Hospital VTE Prevention: Real-time risk scoring in EMR
- Anticoagulation Clinic: AI-assisted warfarin dosing
- DIC Management: Automated scoring and transfusion guidance
- Inherited Disorders: Pattern recognition for factor deficiencies
Author
AI Group - Biomedical AI Platform
Recommended Agent Skills
Expand your agent's capabilities with these related and highly-rated skills.
vcf-annotator
Annotate VCF variants with VEP, ClinVar, gnomAD frequencies, and ancestry-aware context. Generates prioritised variant reports.
chemist-analyst
Analyzes events through chemistry lens using molecular structure, reaction mechanisms, thermodynamics, kinetics, and analytical techniques (spectroscopy, chromatography, mass spectrometry). Provides insights on chemical processes, material properties, reaction pathways, synthesis, and analytical methods. Use when: Chemical reactions, material analysis, synthesis planning, process optimization, environmental chemistry. Evaluates: Molecular structure, reaction mechanisms, yield, selectivity, safety, environmental impact.
bio-alignment-io
Read, write, and convert multiple sequence alignment files using Biopython Bio.AlignIO. Supports Clustal, PHYLIP, Stockholm, FASTA, Nexus, and other alignment formats for phylogenetics and conservation analysis. Use when reading, writing, or converting alignment file formats.
sleep-analyzer
分析睡眠数据、识别睡眠模式、评估睡眠质量,并提供个性化睡眠改善建议。支持与其他健康数据的关联分析。
metabolomics-workbench-database
Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for metabolomics and biomarker discovery.
bio-hi-c-analysis-matrix-operations
Balance, normalize, and transform Hi-C contact matrices using cooler and cooltools. Apply iterative correction (ICE), compute expected values, and generate observed/expected matrices. Use when normalizing or transforming Hi-C matrices.
Didn't find tool you were looking for?