Agent skill

workspace-init

Initialize a new workspace by copying the standard artifact template (STATUS.md, CHECKPOINTS.md, UNITS.csv, DECISIONS.md + folders). **Trigger**: workspace init, initialize workspace, workspace template, 初始化 workspace. **Use when**: 启动任何 pipeline run（必须先有 workspace 工件与目录骨架）。 **Skip if**: workspace 已初始化且不希望覆盖既有文件（除非显式 `--overwrite`）。 **Network**: none. **Guardrail**: 不要修改 `.codex/skills/workspace-init/assets/` 模板；默认不覆盖已有文件。

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Install this agent skill to your Project

npx add-skill https://github.com/WILLOSCAR/research-units-pipeline-skills/tree/main/.codex/skills/workspace-init

SKILL.md

Workspace Init

Create an artifact-first workspace using the standard template under assets/workspace-template/.

This skill is intentionally simple and deterministic.

Input

  • Target workspace directory (usually the current working directory for the run).

Outputs

  • STATUS.md, CHECKPOINTS.md, UNITS.csv, DECISIONS.md
  • GOAL.md
  • queries.md
  • papers/, outline/, citations/, output/ (with placeholder files)

Workflow

  1. Create the target workspace directory if it does not exist.
  2. Copy the contents of assets/workspace-template/ into the workspace.
  3. Do not overwrite existing files unless explicitly requested; prefer merge/append when safe.
  4. Ensure the four core files exist: STATUS.md, UNITS.csv, CHECKPOINTS.md, DECISIONS.md.

Quality checklist

  • Workspace contains the template files and folders.
  • UNITS.csv is valid CSV with the required header.

Side effects

  • Allowed: create missing workspace files/directories.
  • Not allowed: modify the template under .codex/skills/workspace-init/assets/.

Script

Quick Start

  • python .codex/skills/workspace-init/scripts/run.py --help
  • python .codex/skills/workspace-init/scripts/run.py --workspace <workspace_dir>

All Options

  • --overwrite: allow overwriting existing files in the target workspace

Examples

  • Create a new workspace:
    • python .codex/skills/workspace-init/scripts/run.py --workspace workspaces/my-run
  • Re-init and overwrite template files (be careful):
    • python .codex/skills/workspace-init/scripts/run.py --workspace workspaces/my-run --overwrite

Troubleshooting

Issue: workspace already exists and files were not overwritten

Fix:

  • This is the default behavior. Re-run with --overwrite only if you want to replace template files.

Issue: you accidentally tried to use the repo root as a workspace

Fix:

  • Always use workspaces/<name>/ (the runner refuses to use the repo root).

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