Agent skill

structured-decomp

StructuredDecompositions.jl: Sheaves on tree decompositions for FPT algorithms

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npx add-skill https://github.com/majiayu000/claude-skill-registry/tree/main/skills/data/structured-decomp

SKILL.md

Structured Decompositions Skill

Core Concepts

StrDecomp = Functor d: ∫G → C where:

  • ∫G = category of elements of shape graph
  • C = target category (Graph, FinSet, etc.)
julia
using StructuredDecompositions

# Create decomposition from graph
d = StrDecomp(graph)

# Access components
bags(d)           # Local substructures
adhesions(d)      # Overlaps
adhesionSpans(d)  # Span morphisms

The 𝐃 Functor

Lifts decision problems to decomposition space:

julia
# Define problem as functor
k_coloring(G) = homomorphisms(G, K_k)

# Lift and solve
solution = 𝐃(k_coloring, decomp, CoDecomposition)
(answer, _) = decide_sheaf_tree_shape(k_coloring, decomp)

FPT Complexity

Runtime: O(f(width) × n) where width = max adhesion size

GF(3) Triads

dmd-spectral (-1) ⊗ structured-decomp (0) ⊗ koopman-generator (+1) = 0 ✓
sheaf-cohomology (-1) ⊗ structured-decomp (0) ⊗ colimit-reconstruct (+1) = 0 ✓

References

  • Bumpus et al. arXiv:2207.06091
  • algebraicjulia.github.io/StructuredDecompositions.jl

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