Agent skill
instrument-data-allotrope-workflow-overview
Sub-skill of instrument-data-allotrope: Workflow Overview.
Install this agent skill to your Project
npx add-skill https://github.com/vamseeachanta/workspace-hub/tree/main/.claude/skills/_archive/science/bio-research/instrument-data-allotrope/workflow-overview
SKILL.md
Workflow Overview
Workflow Overview
- Detect instrument type from file contents (auto-detect or user-specified)
- Parse file using allotropy library (native) or flexible fallback parser
- Generate outputs:
- ASM JSON (full semantic structure)
- Flattened CSV (2D tabular format)
- Python parser code (for data engineer handoff)
- Deliver files with summary and usage instructions
When Uncertain: If you're unsure how to map a field to ASM (e.g., is this raw data or calculated? device setting or environmental condition?), ask the user for clarification. Refer to
references/field_classification_guide.mdfor guidance, but when ambiguity remains, confirm with the user rather than guessing.
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