ReddRadar
Agent skill
igv-genome-browser
IGV integration skill for interactive genome visualization and review
Install this agent skill to your Project
npx add-skill https://github.com/a5c-ai/babysitter/tree/main/library/specializations/domains/science/bioinformatics/skills/igv-genome-browser
Metadata
Additional technical details for this skill
- tags
-
infrastructure visualization igv genome-browser
- version
- 1.0
- category
- bioinformatics
SKILL.md
IGV Genome Browser Skill
Purpose
Enable IGV integration for interactive genome visualization and review.
Capabilities
- BAM/VCF/BED visualization
- Batch screenshot generation
- Session management
- Track customization
- Region navigation
- Multi-sample comparison
Usage Guidelines
- Load appropriate reference genome
- Configure tracks for analysis needs
- Generate batch screenshots for reports
- Save sessions for reproducibility
- Navigate to regions of interest
- Compare multiple samples visually
Dependencies
- IGV
- IGV.js
- JBrowse2
Process Integration
- Clinical Variant Interpretation (clinical-variant-interpretation)
- Tumor Molecular Profiling (tumor-molecular-profiling)
- Whole Genome Sequencing Pipeline (wgs-analysis-pipeline)
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